BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D07LP1|AL429733
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1731 0.0
>3x_Contig1446
Length = 10598
Score = 1731 bits (873), Expect = 0.0
Identities = 873/873 (100%)
Strand = Plus / Minus
Query: 1 cgctattgggttagaaggatcaatatatggccaggcagagtactacgtgactagccaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 cgctattgggttagaaggatcaatatatggccaggcagagtactacgtgactagccaatt 2307
Query: 61 gcaccaattactatattcaaattttaaggattagtttgaaagagctatctttgcacaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 gcaccaattactatattcaaattttaaggattagtttgaaagagctatctttgcacaaag 2247
Query: 121 gttttatttcagatcaaagttgatgaggcattcaccacaatgtcggggtcagacaaaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gttttatttcagatcaaagttgatgaggcattcaccacaatgtcggggtcagacaaaacg 2187
Query: 181 tatcaactggacgagactactttatacagtgtattgaatctcaagtatggtgcaacagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 tatcaactggacgagactactttatacagtgtattgaatctcaagtatggtgcaacagaa 2127
Query: 241 gtacagataaggaaggcttacatgaagcttgcccgggaattacatccagataaatcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 gtacagataaggaaggcttacatgaagcttgcccgggaattacatccagataaatcaaag 2067
Query: 301 tctgaagaagcaggtgagttgttcaagaaagttgcacacgctcatttcattcttacagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 tctgaagaagcaggtgagttgttcaagaaagttgcacacgctcatttcattcttacagat 2007
Query: 361 aagaaggagaagatgaaatatgatagcaaacttttggcaaaaggtttatatgattattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 aagaaggagaagatgaaatatgatagcaaacttttggcaaaaggtttatatgattattct 1947
Query: 421 ccacgcataccaaatgataaaagccgacaaaatgggatgttcaaagacactgctaagaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 ccacgcataccaaatgataaaagccgacaaaatgggatgttcaaagacactgctaagaat 1887
Query: 481 tctaagactttcaccaacaataataataaggatgatgccagcgctgatacatcgaaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 tctaagactttcaccaacaataataataaggatgatgccagcgctgatacatcgaaatct 1827
Query: 541 aagccaagaaagagccggccctacgaggagcaaccatacggatttggtgtagatactggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 aagccaagaaagagccggccctacgaggagcaaccatacggatttggtgtagatactggt 1767
Query: 601 cgcggatcaggtaaaaacattccactctttaagactttcaatgccaagagttatcagaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 cgcggatcaggtaaaaacattccactctttaagactttcaatgccaagagttatcagaat 1707
Query: 661 agcaagaagtctgtaaccccaccgagaccgaaacaaccctctgaaaaaaataagcgagcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 agcaagaagtctgtaaccccaccgagaccgaaacaaccctctgaaaaaaataagcgagcg 1647
Query: 721 acttcgttctccaatgagaacagaaactctagttctgtaccactggcaaaaaaccaggct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 acttcgttctccaatgagaacagaaactctagttctgtaccactggcaaaaaaccaggct 1587
Query: 781 aaaaagacggctaattcagggtctgctgttggatctgaatcaaggatctcatcatcgggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 aaaaagacggctaattcagggtctgctgttggatctgaatcaaggatctcatcatcgggt 1527
Query: 841 tcagaatcatcttcaaatgtcaattctgctacg 873
|||||||||||||||||||||||||||||||||
Sbjct: 1526 tcagaatcatcttcaaatgtcaattctgctacg 1494
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6956
Number of Sequences: 1807
Number of extensions: 6956
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)